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Figure 1. | Standards in Genomic Sciences

Figure 1.

From: Complete genome sequence of Acidaminococcus fermentans type strain (VR4T)

Figure 1.

Phylogenetic tree highlighting the position of A. fermentans VR4T relative to the other type strain within the genus Acidaminococcus and the type strains of the other genera within the family Acidaminococcaceae. The tree was inferred from 1,348 aligned characters [10,11] of the 16S rRNA gene sequence under the maximum likelihood criterion [12] and rooted with the type strain of Anaerococcus prevotii, a member of the neighboring family Peptococcaceae. The branches are scaled in terms of the expected number of substitutions per site. Numbers above branches are support values from 1,000 bootstrap replicates [13] if larger than 60%. Lineages with type strain genome sequencing projects registered in GOLD [14] are shown in blue, published genomes in bold and include. the recently published GEBA genome from A. prevotii [15] and Veillonella parvula [16].

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