Skip to main content

Table 4 Keystone (Module hubs and Connectors) observed in the microbial co-occurrence networks constructed for each treatment

From: Co-occurrence network analysis unveils the actual differential impact on the olive root microbiota by two Verticillium wilt biocontrol rhizobacteria

Keystone

Treatment

ASV

Taxonomy

N. module

Module hubs

CON

b_ASV00022

Bacteroidetes/Chryseolinea

3

b_ASV00065

Bacteroidetes/Chryseolinea

1

b_ASV00509

Actinobacteria/Nocardioides

0

b_ASV00550

Bacteroidetes/Niabella

0

b_ASV00635

Verrucomicrobia/Alterococcus

5

Vd

b_ASV00271

Actinobacteria/Micromonosporaceae

2

b_ASV00570

Proteobacteria/Gammaproteobacteria

3

PIC73

b_ASV00077

Proteobacteria/Acidibacter

2

b_ASV00092

Bacteroidetes/Terrimonas

5

b_ASV00424

Bacteroidetes/Fulvivirgaceae

0

PICF7

b_ASV00018

Actinobacteria/Actinoplanes

0

b_ASV00264

Proteobacteria/Rhodanobacter

5

b_ASV00468

Proteobacteria/Mesorhizobium

5

b_ASV00557

Proteobacteria/Rhodoplanes

1

b_ASV00635

Verrucomicrobia/Alterococcus

4

f_ASV0008

Ascomycota

8

PIC73_Vd

b_ASV00005

Proteobacteria/Dongia

3

b_ASV00018

Actinobacteria/Actinoplanes

0

b_ASV00065

Bacteroidetes/Chryseolinea

0

b_ASV00283

Chloroflexi/Ktedonobacter

2

b_ASV00431

Proteobacteria/Bradyrhizobiaceae

6

PICF7_Vd

b_ASV00018

Actinobacteria/Actinoplanes

0

b_ASV00038

Spirochaetes/Spirochaeta

4

b_ASV00047

Proteobacteria/Myxococcales

3

b_ASV00077

Proteobacteria/Acidibacter

0

b_ASV00242

Actinobacteria/Jatrophihabitans

1

b_ASV00513

Verrucomicrobia/Lacunisphaera

1

Connectors

CON

b_ASV00568

Proteobacteria/Pedomicrobium

0

b_ASV00704

Actinobacteria/Acidimicrobiales

4

Vd

b_ASV00005

Proteobacteria/Dongia

9

b_ASV00237

Proteobacteria/Dyella

3

b_ASV00464

Proteobacteria/Methylocystis

6

PIC73

b_ASV00271

Actinobacteria/Micromonosporaceae

4

b_ASV00337

Verrucomicrobia/Subdivision3

3

b_ASV00339

Proteobacteria/Burkholderiales

0

f_ASV0048

Basidiomycota/Clitopilus

0

PIC73_Vd

b_ASV00242

Actinobacteria/Jatrophihabitans

1

b_ASV00611

Planctomycetes/Bythopirellula

6

PICF7_Vd

b_ASV00535

Proteobacteria/Bradyrhizobiaceae

6

  1. ASV, amplicon sequence variants; Taxonomy, phylum/lowest taxonomic level that could be reached for the identification of the keystone; Module number, number of the module in which the keystone was located. Treatments: control (CON), Paenibacillus polymyxa PIC73-treated (PIC73), Pseudomonas simiae PICF7-treated (PICF7), Verticillium dahliae-inoculated (Vd), P. polymyxa/V. dahliae-inoculated (PIC73_Vd) and P. simiae/V. dahliae-inoculated (PICF7_Vd) plants