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Fig. 6 | Environmental Microbiome

Fig. 6

From: Potato root-associated microbiomes adapt to combined water and nutrient limitation and have a plant genotype-specific role for plant stress mitigation

Fig. 6

Distinct mobile elements between potato rhizosphere metagenomes. All box plots show the twelve samples of (i) no stress Desiree, (ii) no stress Stirling, (iii) stress Desirée and (iv) stress Stirling by A the diversity by Shannon Index B the number of relative reads of plasmids and phages of all taxonomic classified reads, and C diversity by Shannon Index considering only antibiotic resistance genes (ARG). In D and E each tile represents a bacterial taxon that is plotted by its plasmids log2 Fold Changes (FC) against the bacteria FC. Only taxa with a significant plasmid-FC are shown (FDR < 0.05). The plasmid and bacterial abundances change in the same ratio for taxa close to the diagonal line, while taxa close to the vertical line have a higher foldchange for plasmids compared to the FC of whole bacteria, indicating important functions on plasmids under distinct D stress treatments and E stressed rhizospheres of genotypes

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