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Fig. 3 | Environmental Microbiome

Fig. 3

From: The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

Fig. 3

Phylogenetic placement of Patescibacteria MAGs after binning and refinement. A Genome completeness distribution of the MAGs classified as Patescibacteria by GTDB-Tk alone (174, orange-colored bars), and by both GTDB-Tk and Anvi’o (291, teal-colored bars). B Phylogenetic tree based on 68 core proteins from all bacterial MAGs (1087) using Approximate Maximum Likelihood in FastTree2 with 1000 bootstrap replications. Bacterial taxa other than Patescibacteria were collapsed together and only Patescibacteria are colored as per their taxonomic assignments from GTDB-Tk. The bootstrap values of 0.9 and above are indicated by filled circles. The phylogenetic tree is supplied as Additional file 3

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