Table 3 Functional profile of isolated endophytes from barley seed
From: The treasure inside barley seeds: microbial diversity and plant beneficial bacteria
Isolate BOX fingerprint (number of strains) | Species (% identity according to NCBI) | % identity to ASV | Protease | β-1,3-glucanase | Cellulase | Chitinase | Phosphatase | ACC deaminase | Siderophore | AHL long chain | AHL short chain | IAA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Morex-5 | Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 (99.24%) | ASV_2714 (100%) | + | + | + | − | − | − | − | − | − | + |
Morex-7 | Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 (98.81%) | ASV_2714 (99.63%) | + | + | + | − | − | − | − | − | − | (+) |
HOR7985-2 | Curtobacterium flaccumfaciens strain VR38 (97.21) | ASV_2714 (98.90%) | + | (+) | − | − | − | − | − | − | − | + |
HOR7985-4 | Curtobacterium sp. Strain R209Ag (96.11) | ASV_2714 (94.16%) | + | + | + | − | − | − | − | − | − | + |
HOR7985-6 | Curtobacterium sp. 5121 (97.59%) | ASV_2714 (98.90%) | + | + | + | − | − | − | − | − | − | + |
BCC1415-3 (2) | Curtobacterium flaccumfaciens strain EB337 (98.76%) | ASV_2714 (99.27%) | + | + | + | − | − | − | − | − | − | + |
BCC1415-4 | Curtobacterium herbarum strain EB348 (98.07%) | ASV_2714 (99.27%) | + | − | − | − | − | − | − | − | − | − |
BCC436-1 (2) | Curtobacterium flaccumfaciens strain EB337 (99.01%) | ASV_2714 (98.91%) | + | (+)/+ | + | − | − | − | − | − | − | + |
BCC436-3 | Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 (98.16%) | ASV_2714 (98.55%) | + | + | + | − | − | − | − | − | − | + |
BCC436-7 | Curtobacterium flaccumfaciens strain EB337 (98.47%) | ASV_2714 (99.27%) | + | (+) | + | − | − | − | − | − | − | + |
BCC436-10 | Curtobacterium flaccumfaciens strain EB337 (97.93%) | ASV_2714 (99.27%) | + | − | + | − | − | − | − | − | − | + |
BCC1589-10 | Curtobacterium flaccumfaciens strain EB337 (98.47%) | ASV_2714 (99.27%) | + | ++ | + | − | − | − | − | − | − | + |
BCC1589-3 | Curtobacterium flaccumfaciens strain EB337 (98.70%) | ASV_2714 (99.27%) | + | (+) | + | − | − | − | − | − | − | + |
HOR7985-12 | Deinococcus radiopugnans strain SEFSRH1 (98.77) | ASV_12237 (83.39%) | − | − | − | − | + | + | − | − | − | +++ |
HOR7985-1 | Epilithonimonas sp. ARS123b-11 (97.93%) | ASV_5185 (99.62%) | − | − | − | − | − | − | − | − | − | +++ |
BCC1415-5 | Erwinia sp. strain KUDC3013 (97.47%) | ASV_13403 (98.21%) | − | − | − | − | + | (+) | + | − | − | +++ |
BCC1415-10 | Erwinia sp. strain KUDC3014 (98.16%) | ASV_13403 (97.86%) | − | − | − | − | + | − | + | + | − | +++ |
BCC1589-1 | Erwinia sp. strain KUDC3013 (96.86%) | ASV_13403 (98.56%) | − | − | − | − | + | (+) | + | + | − | +++ |
HOR7985-3 | Kosakonia sp. Strain P52 (96.09%) | ASV_13391 (97.43%) | − | − | − | − | + | − | + | − | − | ++ |
BCC436-2 | Kosakonia cowanii strain Esp (97.20%) | ASV_13391 (98.19%) | − | − | − | − | + | − | + | − | − | ++ |
BCC768-4 | Kosakonia cowanii strain IHB B 17,550 (96.45%) | ASV_13391 (99.27%) | − | − | − | − | + | − | + | − | − | ++ |
BCC1589-7 | Leucobacter sp. strain BIS1127 (97.93%) | ASV_2724 (98.91%) | − | − | − | − | − | − | − | − | − | ++ |
BCC1589-8 | Microbacterium sp. VA8728_00 (99.05%) | ASV_2816 (99.62%) | − | ++ | − | (+) | − | − | − | − | − | ++ |
Golden Promise-5 (5) | Paenibacillus sp. Strain UASWS1731 (99.27%) | ASV_7346 (99.63%) | + | + | + | + | − | − | − | − | − | ++ |
HOR7985-7 (3) | Paenibacillus sp. Strain P_s_AC5A (97.89) | ASV_7347 (99.23%)* | + | + | + | ± | − | (+)/− | − | − | − | ++ |
BCC1415-1 | Paenibacillus sp. TI45-13ar (97.89%) | ASV_7346 (100%)* | + | ++ | + | (+) | − | − | − | − | − | + |
BCC1415-7 | Paenibacillus sp. TI45-13ar (97.84%) | ASV_7346 (100%)* | + | ++ | + | − | − | − | − | − | − | + |
BCC436-9 (2) | Paenibacillus sp. TI45-13ar (97.65%) | ASV_7346 (100%)* | + | ++ | + | ± | − | − | − | − | − | ++ |
BCC1589-2 | Paenibacillus sp. TI45-13ar (98.40%) | ASV_7346 (99.57%) | + | ++ | + | + | − | − | − | − | − | ++ |
BCC1589-9 (2) | Paenibacillus sp. TI45-13ar (99.01%) | ASV_7346 (99.63%) | + | ++ | + | + | − | − | − | − | − | ++ |
Golden Promise-9 | Pantoea agglomerans strain SSH (98.56%) | ASV_13403 (100%)* | − | − | − | − | + | + | + | − | (+) | +++ |
HOR7985-9 | Pantoea sp. Strain Awest_I_3B (96.22%) | ASV_13403 (97.46%) | − | − | − | − | + | + | + | − | + | +++ |
BCC436-8 | Pantoea sp. CH-N10 (98.01%) | ASV_13403 (98.92%) | − | − | − | − | + | − | + | + | − | +++ |
BCC1415-2 | Saccharibacillus sp. WB 17 (96.22%) | ASV_7417 (99.26%) | − | − | + | − | − | − | − | − | − | − |
BCC768-2 | Saccharibacillus deserti strain WLJ055 (97.01%) | ASV_7417 (99.63%) | − | + | (+) | − | − | + | − | − | − | − |
BCC768-5 | Saccharibacillus deserti strain WLJ055 (97.09%) | ASV_7426 (96.08%)* | − | + | + | − | − | + | (+) | − | − | ++ |
BCC1589-4 | Saccharibacillus sp. WB 17 (95.88%) | ASV_7444 (95.37%) | − | (+) | + | − | − | − | − | − | − | − |
BCC1589-5 | Saccharibacillus brassicae strain ATSA2 (95.17%) | ASV_7421 (98.70%) | − | + | + | − | − | (+) | − | − | − | − |
Golden Promise-4 | Sanguibacter sp. Strain NN06 (99.42%) | ASV_2905 (99.63%) | − | (+) | − | − | − | (+) | − | − | − | − |
Morex-2 (8) | Sanguibacter inulinus strain KAR59 (97.39%) | ASV_2905 (97.14%) | − | − | ± | − | − | (+)/− | − | − | − | − |
BCC1415-9 (2) | Sanguibacter sp. b222 (98.00%) | ASV_2905 (98.55%) | − | (+)/− | − | (+)/− | − | − | − | − | − | − |
BCC436-4 | Sanguibacter inulinus strain KAR59 (96.39%) | ASV_2905 (97.46%) | − | − | − | − | − | − | − | − | − | − |
BCC768-1 | Sanguibacter inulinus strain 12H (98.74%) | ASV_2905 (99.27%) | − | + | − | − | − | + | − | − | − | − |
BCC768-3 (2) | Sanguibacter inulinus strain 12H (98.11%) | ASV_2905 (98.53%) | − | + | − | − | − | − | − | − | − | − |
BCC768-7 | Sanguibacter sp. Strain NN06 (98.00%) | ASV_2905 (99.63%) | − | + | − | − | − | + | − | − | − | − |
Golden Promise-1 (3) | Stenotrophomonas sp. Es35 (96.97%) | ASV_13942 (99.63%) | + | − | − | − | − | − | (+) | − | − | + |