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Table 1 Taxonomic affiliations and characteristics of selected metagenome-assembled genomes (MAGs) most abundant in HR biofilms

From: Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics

MAGTaxonomic affiliation1MAG features
PhylumClassOrderFamilyGenusComleteness2 [%]Contamination2 [%]Size [bp]GC content [%]No. of genesNo. of rrn genesNo. of tRNA genes
Bacteria
 13FirmicutesUnknownUnknownUnknownUnknown29.743.431,239,77444.811159331
 17*BacteroidetesBacteroidiaBacteroidalesBacteroidaceaePrevotella sp.68.028.982,689,59748.902294239
 18*FirmicutesClostridiaLachnospiralesLachnospiraceaeAcetivibrio sp.68.503.652,855,08939.032917n/d315
 40*FirmicutesClostridiaLachnospiralesLachnospiraceaeHerbinix sp.68.427.661,849,94036.651755n/d8
 48FirmicutesClostridiaLachnospiralesLachnospiraceaeHerbinix sp.26.482.63770,64437.4614n/d3
 50FirmicutesClostridiaLachnospiralesDefluviitaleaceaeUnknown51.746.141,725,34931.021775n/d31
 68FirmicutesClostridiaLachnospiralesLachnospiraceaeHerbinix sp.52.174.772,358,48846.612310227
 84FirmicutesClostridiaLachnospiralesUnknownUnknown35.225.141,970,47638.811672217
 85FirmicutesUnknownUnknownUnknownUnknown80.113.082,011,31147.982076n/d33
 106FirmicutesClostridiaClostridialesClostridiaceaeClostridium sp.33.094.39883,78731.79812n/d17
 107*FirmicutesClostridiaClostridialesClostridiaceaeClostridium sp.50.066.971,539,55629.371648n/d17
 108*BacteroidetesBacteroidiaBacteroidalesUnknownUnknown79.018.212,032,21547.602025129
 109BacteroidetesBacteroidiaBacteroidalesDysgonomonadaceaeProteiniphilum sp.63.527.192196,92845.072196127
 132FirmicutesClostridiaUnknownUnknownUnknown26.262.371,284,97737.031286n/d16
 134*FirmicutesClostridiaLachnospiralesLachnospiraceaeKineothrix sp.78.469.272,788,29140.862946n/d31
 145FirmicutesBacilliLactobacillalesAerococcaceaeJeotgalibaca sp.63.379.482,346,03746.042647n/d14
 146FirmicutesBacilliUnknownUnknownUnknown33.220.00861,84438.49705113
Archaea
 111EuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium sp.73.748.572,134,56337.982406251
  1. 1 GTDB-Tk based classification
  2. 2 For details, refer to [22] and Additional file 4
  3. 3 n/d = not detected
  4. * MAGs which showed increased transcriptional activity in responce to the organic loading rate (OLR)