Table 3 Abundant microbial taxa in subway air samples (MetaSUB v. Zymobiomics method)
MetaSUB v. Zymobiomics | |||||||
MetaSub | Zymobiomics | ||||||
Phylum | prevalence | abundance | Phylum | prevalence | Abundance | ||
mean | total | mean | total | ||||
Actinobacteria | 2.7 | 9271 | 51.61% | Actinobacteria | 2.7 | 9301 | 57.72% |
Proteobacteria | 2.3 | 14,269 | 27.02% | Proteobacteria | 2.2 | 13,421 | 23.67% |
Firmicutes | 1.6 | 3250 | 4.76% | Ascomycota | 2.5 | 1899 | 4.91% |
Bacteroidetes | 2.0 | 2999 | 4.74% | Basidiomycota | 2.4 | 622 | 4.75% |
Ascomycota | 2.4 | 1843 | 4.42% | Firmicutes | 1.3 | 2705 | 3.30% |
Basidiomycota | 2.3 | 606 | 3.84% | Bacteroidetes | 1.5 | 2257 | 2.77% |
Cyanobacteria | 2.3 | 526 | 1.35% | Deinococcus-Thermus | 2.6 | 204 | 1.26% |
Deinococcus-Thermus | 2.5 | 196 | 1.23% | Cyanobacteria | 1.9 | 432 | 0.66% |
Euryarchaeota | 1.7 | 450 | 0.62% | Euryarchaeota | 1.5 | 393 | 0.58% |
Acidobacteria | 2.5 | 112 | 0.08% | Acidobacteria | 2.6 | 114 | 0.08% |
Family | prevalence | abundance | Family | prevalence | Abundance | ||
mean | total | mean | total | ||||
Micrococcaceae | 2.8 | 801 | 15.72% | Micrococcaceae | 2.8 | 822 | 20.34% |
Nocardioidaceae | 2.8 | 308 | 6.51% | Nocardioidaceae | 2.9 | 311 | 6.65% |
Microbacteriaceae | 2.6 | 1222 | 4.89% | Microbacteriaceae | 2.6 | 1235 | 4.70% |
Sphingomonadaceae | 2.8 | 1006 | 3.88% | Geodermatophilaceae | 3.0 | 150 | 4.24% |
Geodermatophilaceae | 3.0 | 150 | 3.67% | Sphingomonadaceae | 2.8 | 1013 | 4.04% |
Moraxellaceae | 1.9 | 608 | 3.54% | Intrasporangiaceae | 3.0 | 211 | 3.46% |
Intrasporangiaceae | 3.0 | 211 | 3.15% | Corynebacteriaceae | 2.6 | 571 | 3.35% |
Comamonadaceae | 2.6 | 800 | 2.94% | Comamonadaceae | 2.7 | 838 | 3.02% |
Corynebacteriaceae | 2.6 | 568 | 2.93% | Rhodobacteraceae | 2.6 | 1484 | 2.28% |
Staphylococcaceae | 2.3 | 401 | 2.17% | Moraxellaceae | 1.6 | 533 | 2.14% |
Genus | prevalence | abundance | Genus | prevalence | Abundance | ||
mean | total | mean | total | ||||
Micrococcus | 2.9 | 29 | 7.27% | Micrococcus | 2.9 | 29 | 9.34% |
Arthrobacter | 2.8 | 399 | 5.32% | Arthrobacter | 2.9 | 413 | 6.44% |
Nocardioides | 2.8 | 176 | 3.51% | Nocardioides | 2.9 | 177 | 3.57% |
Sphingomonas | 2.9 | 461 | 3.09% | Kocuria | 2.7 | 79 | 3.44% |
Corynebacterium | 2.6 | 568 | 2.93% | Corynebacterium | 2.6 | 571 | 3.35% |
Psychrobacter | 2.0 | 141 | 2.85% | Sphingomonas | 2.9 | 464 | 3.23% |
Blastococcus | 3.0 | 60 | 2.44% | Blastococcus | 3.0 | 60 | 2.92% |
Staphylococcus | 2.2 | 308 | 2.02% | Psychrobacter | 2.7 | 184 | 1.82% |
Kocuria | 2.7 | 79 | 2.02% | Dietzia | 3.0 | 51 | 1.70% |
Hymenobacter | 2.9 | 98 | 1.92% | Paracoccus | 2.9 | 167 | 1.58% |
Species | prevalence | abundance | Species | prevalence | Abundance | ||
mean | total | mean | total | ||||
Micrococcus luteus | 3.0 | 3 | 1.13% | Micrococcus luteus | 3.0 | 3 | 1.44% |
Arthrobacter sp. H41 | 3.0 | 3 | 1.00% | Arthrobacter sp. H41 | 3.0 | 3 | 1.38% |
Rubrobacter aplysinae | 3.0 | 3 | 0.78% | Rubrobacter aplysinae | 3.0 | 3 | 0.97% |
Arthrobacter sp. Leaf234 | 3.0 | 3 | 0.67% | Arthrobacter sp. Leaf234 | 3.0 | 3 | 0.89% |
Marmoricola sp. Leaf446 | 3.0 | 3 | 0.65% | Stereum hirsutum | 3.0 | 3 | 0.76% |
Chlorogloea sp. CCALA 695 | 3.0 | 3 | 0.63% | Marmoricola sp. Leaf446 | 3.0 | 3 | 0.76% |
Deinococcus marmoris | 3.0 | 3 | 0.60% | Fomitopsis pinicola | 3.0 | 3 | 0.68% |
Stereum hirsutum | 3.0 | 3 | 0.50% | Blastococcus sp. DSM 44268 | 3.0 | 3 | 0.64% |
Blastococcus sp. DSM 44268 | 3.0 | 3 | 0.48% | Deinococcus marmoris | 3.0 | 3 | 0.57% |
Fomitopsis pinicola | 3.0 | 3 | 0.45% | Lecanicillium sp. LEC01 | 3.0 | 3 | 0.57% |