Table 1 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,092,893 | 100 |
DNA coding (bp) | 3,665,857 | 89.57 |
DNA G+C (bp) | 2,167,294 | 52.95 |
DNA scaffolds | 25 | |
Total genes | 4037 | 100 |
Protein coding genes | 3977 | 98.51 |
RNA genes | 60 | 1.49 |
Pseudo genes | 0 | 0 |
Genes in internal clusters | 830 | 20.56 |
Genes with function prediction | 3220 | 79.76 |
Genes assigned to COGs | 2805 | 69.48 |
Genes with Pfam domains | 3308 | 81.94 |
Genes with signal peptides | 324 | 8.03 |
Genes with transmembrane helices | 819 | 20.29 |
CRISPR repeats | 0 | 0 |