Skip to main content

Advertisement

Table 1 Terrestrial Nitrosospira AOB strains used in this study with related amoA and 16S rRNA gene phylogenetic affiliations (based on the phylogenetic trees presented in Fig. 1)

From: The application of high-throughput sequencing technology to analysis of amoA phylogeny and environmental niche specialisation of terrestrial bacterial ammonia-oxidisers

Organism amoA gene lineage 16S rRNA gene lineage
Nitrosospira multiformis Nsp16 D1 S3a
Nitrosospira sp. Nsp18 D1 S3a
Nitrosospira sp. 1 Nsp11 D1 S3a
Nitrosospira briensis C-128 D2 S3b
Nitrosospira sp. Nsp1 D2 S3b
Nitrosospira sp. NRS527 D2 S3b
Nitrosospira sp. Nsp40 D3 S3b
Nitrosospira sp. Nsp22 D4 S3b
Nitrosospira tenuis Nv12 D5 S3c
Nitrosospira sp. Nv6 D5 S3c
Nitrosospira sp. Nsp37 D5 S3c
Nitrosospira sp. Nv4 D5 S3c
Nitrosospira sp. Nsp62 D6 S3d
Nitrosospira briensis Nsp10 D7 S3e
Nitrosospira briensis Nsp8 D7 S3e
Nitrosospira sp. Nsp14 D8 S3f
Nitrosospira sp. Nsp17 D8 S3f
Nitrosospira sp. Nsp2 D8 S3 g
Nitrosospira sp. Nsp44 D8 S3 h
Nitrosospira multiformis 24C D9 S3i
Nitrosospira sp. L115 D9 S3i
Nitrosospira sp. A16 D9 S3i
Nitrosospira sp. AF D9 S3i
Nitrosospira tenuis Nv1 D10 S3i
Nitrosospira multiformis ATCC 25196 D11 S3k
Nitrosospira multiformis Nl13 D11 S3k
Nitrosospira multiformis Nl4 D11 S3k
Nitrosospira multiformis Nl18 D11 S3k
Nitrosospira multiformis Nl15 D11 S3k
Nitrosospira multiformis Nl14 D11 S3k
Nitrosospira multiformis Nl7 D11 S3k
Nitrosospira multiformis Nl8 D11 S3k
Nitrosospira multiformis Nl12 D11 S3 l
Nitrosospira multiformis Nl2 D11 S3 m
Nitrosospira multiformis Nl3 D11 S3n
Nitrosospira sp. Nsp65 D12 S65
Nitrosospira sp. 56–18 D12 S65
Nitrosospira sp. Nsp5 D13 S0
Nitrosospira multiformis Nl1 D13 S0
Nitrosospira sp. Nsp13 D13 S0
Nitrosospira sp. Nsp6 D13 S0
Nitrosospira sp. Nsp12 D13 S0
Nitrosospira sp. 40KI D13 S0
Nitrosospira sp. NpAV D14 S0
Nitrosospira lacus APG3 D16 S0
Nitrosospira sp. Ka4 D16 S4
Nitrosospira sp. Ka3 D16 S4
Nitrosospira sp. Nsp41 D16 S3p
Nitrosospira sp. Nsp58 D16 S57
Nitrosospira sp. B6 D16 S2
Nitrosospira sp. III7 D15 S2
Nitrosospira sp. O13 D15 S2
Nitrosospira sp. O4 D15 S2
Nitrosospira sp. AHB1 D15 S2
Nitrosospira sp. Nsp57 D17 S57
Nitrosospira sp. Nl5 D17 S57