Table 1 Proteins related to exo- and lipopolysaccharide production with corresponding KO numbers, HMM IDs and genes
Protein | KO number | HMM ID | Gene |
|---|---|---|---|
polysaccharide export outer membrane protein Wza | K01991 | PF02563 | wza |
alginate export outer membrane protein AlgE | K16081 | PF13372 | algE |
alginate biosynthesis acetyltransferase AlgJ | K19295 | PF16822 | algJ |
colanic acid biosynthesis acetyltransferase WcaB | K03819 | TIGR04016 | wcaB |
colanic acid biosynthesis acetyltransferase WcaF | K03818 | TIGR04008 | wcaF |
colanic acid/amylovoran biosynthesis pyruvyl transferase WcaK/AmsJ | K16710 | TIGR04006 | wcaK/amsJ |
capsular polysaccharide export system permease KpsE | K10107 | TIGR01010 | kpsE |
exopolysaccharide biosynthesis transmembrane protein EpsG | K19419 | PF14897 | epsG |
exopolysaccharide biosynthesis tyrosine kinase modulator EpsA | K19420 | TIGR01006 | epsA |
levansucrase SacB | K00692 | PF02435 | sacB |
lipopolysaccharide transport system ATP-binding protein Wzt | K09691 | PF14524 | wzt |
LptBFGC lipopolysaccharide export complex permease LptF | K07091 | TIGR04407 | lptF |
LptBFGC lipopolysaccharide export complex permease LptG | K11720 | TIGR04408, PF03739 | lptG |
LptBFGC lipopolysaccharide export complex inner membrane protein LptC | K11719 | TIGR04409, PF06835 | lptC |