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Table 5 Summary of the average number of genes and percentage of each genome representing each COG functional category associated with the 26 C. sakazakii strains evaluated in this studya

From: Draft genomes of Cronobacter sakazakii strains isolated from dried spices bring unique insights into the diversity of plant-associated strains

Code Value %age Description
J 177 4.5 Translation, ribosomal structure and biogenesis
A 1 0.0 RNA processing and modification
K 304 7.8 Transcription
L 168 4.3 Replication, recombination and repair
B 0 0.0 Chromatin structure and dynamics
D 46 1.2 Cell cycle control, Cell division, chromosome partitioning
V 54 1.4 Defense mechanisms
T 149 3.8 Signal transduction mechanisms
M 245 6.3 Cell wall/membrane biogenesis
N 75 1.9 Cell motility
U 64 1.6 Intracellular trafficking and secretion
O 146 3.8 Posttranslational modification, protein turnover, chaperones
C 206 5.3 Energy production and conversion
G 323 8.3 Carbohydrate transport and metabolism
E 281 7.2 Amino acid transport and metabolism
F 102 2.6 Nucleotide transport and metabolism
H 148 3.8 Coenzyme transport and metabolism
I 84 2.1 Lipid transport and metabolism
P 235 6.0 Inorganic ion transport and metabolism
Q 46 1.2 Secondary metabolites biosynthesis, transport and catabolism
R 0 0.0 General function prediction only
S 894 22.9 Function unknown
154 4.0 Not in COGs
  1. The total is based on the total average number of protein coding genes (3902) for the genome. aNote: A summary of the total number of COG alleles per strain is shown in Additional file 2: Table S2. Individual strain’s genome statistics is shown in Additional file 3: Table S3