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Table 6 Secretion system repertoire in Rl Norway

From: Complete genome of Rhizobium leguminosarum Norway, an ineffective Lotus micro-symbiont

Secretion system

Location

Mandatory genes (gene identifier)

Type I secretion system (T1SS)

 T1SSa

Chromosome

hlyD (CUJ84_Chr000199), hlyB (CUJ84_Chr000200)

 T1SSb

Chromosome

hlyD (CUJ84_Chr000279), hlyB (CUJ84_Chr000280)

 T1SSc

Chromosome

hlyD (CUJ84_Chr002330), hlyB (CUJ84_Chr002331)

 T1SSd

Chromosome

prsE (CUJ84_Chr003677), prsD (CUJ84_Chr003678)

 T1Sse

Chromosome

hlyD (CUJ84_Chr004833), hlyB (CUJ84_Chr004834)

 T4SSa

pRLN1

virB1 (CUJ84_pRLN1000390), virB2 (CUJ84_pRLN1000391), virB3 (CUJ84_pRLN1000392), virB4 (CUJ84_pRLN1000393), virB5 (CUJ84_pRLN1000394), virB6 (CUJ84_pRLN1000396), virB8 (CUJ84_pRLN1000398), virB9 (CUJ84_pRLN1000399), virB10 (CUJ84_pRLN1000400)

Type 5 secretion system (T5SS)

 T5SSa

Chromosome

autB (CUJ84_Chr000739)

 T5SSb

Chromosome

Partial autB (CUJ84_Chr002323)

 T5SSc

pRLN2

tpsA (CUJ84_pRLN2000298), tpsB (CUJ84_pRLN2000297)

Type 6 secretion system (T6SS)

 T6SS

pRLN1

tssB (CUJ84_pRLN1000762), tssC (CUJ84_pRLN1000760, CUJ84_pRLN1000761), tssD (CUJ84_pRLN1000765), tssE (CUJ84_pRLN1000758), tssF (CUJ84_pRLN1000757), tssG (CUJ84_pRLN1000756), tssH (CUJ84_pRLN1000764), tssI (CUJ84_pRLN1000767), tssK (CUJ84_pRLN1000754), tssL (CUJ84_pRLN1000753), tssM (CUJ84_pRLN1000752)