Table 4 Number of genes associated with general COG functional categories
From: Complete genome of Rhizobium leguminosarum Norway, an ineffective Lotus micro-symbiont
Code | Value | %age | Description |
|---|---|---|---|
J | 210 | 2.67 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 686 | 8.72 | Transcription |
L | 219 | 2.78 | Replication, recombination and repair |
B | 2 | 0.03 | Chromatin structure and dynamics |
D | 40 | 0.51 | Cell cycle control, Cell division, chromosome partitioning |
V | 74 | 0.94 | Defense mechanisms |
T | 415 | 5.28 | Signal transduction mechanisms |
M | 334 | 4.25 | Cell wall/membrane biogenesis |
N | 92 | 1.17 | Cell motility |
U | 106 | 1.35 | Intracellular trafficking and secretion |
O | 199 | 2.53 | Posttranslational modification, protein turnover, chaperones |
C | 342 | 4.35 | Energy production and conversion |
G | 709 | 9.01 | Carbohydrate transport and metabolism |
E | 831 | 10.56 | Amino acid transport and metabolism |
F | 117 | 1.49 | Nucleotide transport and metabolism |
H | 210 | 2.67 | Coenzyme transport and metabolism |
I | 270 | 3.43 | Lipid transport and metabolism |
P | 318 | 4.04 | Inorganic ion transport and metabolism |
Q | 206 | 2.62 | Secondary metabolites biosynthesis, transport and catabolism |
R | 905 | 11.51 | General function prediction only |
S | 630 | 8.01 | Function unknown |
– | 1760 | 22.37 | Not in COGs |