Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 217 | 8.26 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 167 | 6.36 | Transcription |
L | 102 | 3.88 | Replication, recombination and repair |
B | 1 | 0.04 | Chromatin structure and dynamics |
D | 42 | 1.60 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 59 | 2.25 | Defense mechanisms |
T | 128 | 4.87 | Signal transduction mechanisms |
M | 140 | 5.33 | Cell wall/membrane biogenesis |
N | 45 | 1.71 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 8 | 0.30 | Extracellular structures |
U | 29 | 1.10 | Intracellular trafficking and secretion |
O | 115 | 4.38 | Posttranslational modification, protein turnover, chaperones |
C | 131 | 4.99 | Energy production and conversion |
G | 160 | 6.09 | Carbohydrate transport and metabolism |
E | 257 | 9.78 | Amino acid transport and metabolism |
F | 96 | 3.65 | Nucleotide transport and metabolism |
H | 141 | 5.37 | Coenzyme transport and metabolism |
I | 148 | 5.63 | Lipid transport and metabolism |
P | 138 | 5.25 | Inorganic ion transport and metabolism |
Q | 69 | 2.63 | Secondary metabolites biosynthesis, transport and catabolism |
R | 255 | 9.71 | General function prediction only |
S | 167 | 6.36 | Function unknown |
X | 12 | 0.46 | Mobilome: prophage, transposons |
– | 877 | 27.66 | Not in COGs |