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Table 3 Genome statistics

From: One complete and three draft genome sequences of four Brochothrix thermosphacta strains, CD 337, TAP 175, BSAS1 3 and EBP 3070

Attribute CD 337 TAP 175 BSAS1 3 EBP 3070
Value % of Total Value % of Total Value % of Total Value % of Total
Genome size (bp) 2,594,337 100 2,506,748 100 2,617,996 100 2,541,668 100
DNA coding (bp) 2,182,130 84.11 2,136,251 85.22 2,213,516 84.55 2,118,751 83.36
DNA G + C (bp) 945,895 36.46 909,448 36.28 947,714 36.20 920,592 36.22
DNA scaffolds 1 100 57 100 83 100 71 100
Total genes 2743 100 2638 100 2796 100 2740 100
Protein coding genes 2593 94.53 2515 95.3 2668 95.4 2611 95.3
RNA genes 28 1.0 6 0.2 8 0.3 9 0.3
Pseudo genes 38 1.4 43 1.6 57 2.0 102 3.7
Genes in internal clusters N/D N/D N/D N/D
Genes with function prediction 2031 74.04 1928 73.1 1957 70.0 1954 71.3
Genes assigned to COGs 2486 90.6 2429 92.1 2472 88.4 2432 88.7
Genes with Pfam domains 2026 73.9 1982 75.1 2040 73.0 2002 73.1
Genes with signal peptides 85 3.1 83 3.1 83 3.0 85 3.1
Genes with transmembrane helices 392 14.3 384 14.5 386 13.8 389 14.2
CRISPR repeats 1 0.04 2 0.07 1 0.03 0 0