Table 5 Number of genes associated with general COG functional categories
Code | ‘Ca. Chloroploca asiatica’ B7–9 | ‘Ca. Viridilinea mediisalina’ Kir15-3F | Description | ||
|---|---|---|---|---|---|
Value | %age | Value | %age | ||
J | 178 | 6.05 | 178 | 6.79 | Translation, ribosomal structure and biogenesis |
A | – | – | – | – | RNA processing and modification |
K | 163 | 5.54 | 144 | 5.49 | Transcription |
L | 105 | 3.57 | 110 | 4.19 | Replication, recombination and repair |
B | 2 | 0.07 | 1 | 0.04 | Chromatin structure and dynamics |
D | 43 | 1.46 | 36 | 1.37 | Cell cycle control, Cell division, chromosome partitioning |
V | 74 | 2.52 | 81 | 3.09 | Defense mechanisms |
T | 215 | 7.31 | 248 | 9.45 | Signal transduction mechanisms |
M | 225 | 7.65 | 207 | 7.89 | Cell wall/membrane biogenesis |
N | 24 | 0.82 | 24 | 0.91 | Cell motility |
U | 29 | 0.99 | 32 | 1.22 | Intracellular trafficking and secretion |
O | 140 | 4.76 | 136 | 5.18 | Posttranslational modification, protein turnover, chaperones |
C | 193 | 6.56 | 154 | 5.87 | Energy production and conversion |
G | 198 | 6.73 | 135 | 5.03 | Carbohydrate transport and metabolism |
E | 254 | 8.64 | 202 | 7.70 | Amino acid transport and metabolism |
F | 83 | 2.82 | 69 | 2.63 | Nucleotide transport and metabolism |
H | 191 | 6.50 | 163 | 6.21 | Coenzyme transport and metabolism |
I | 128 | 4.35 | 104 | 3.96 | Lipid transport and metabolism |
P | 150 | 5.10 | 142 | 5.41 | Inorganic ion transport and metabolism |
Q | 61 | 2.07 | 39 | 1.49 | Secondary metabolites biosynthesis, transport and catabolism |
R | 307 | 10.44 | 280 | 10.67 | General function prediction only |
S | 127 | 4.32 | 110 | 4.19 | Function unknown |
– | 2244 | 46.00 | 2301 | 49.41 | Not in COGs |