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Table 5 Number of genes of P. maritimus Y42 with the general COG functional categories

From: The complete genomic sequence of a novel cold-adapted bacterium, Planococcus maritimus Y42, isolated from crude oil-contaminated soil

Code Value % of totala Description
J 225 7.34 Translation, ribosomal structure and biogenesis
A 0 0 RNA processing and modification
K 185 6.04 Transcription
L 117 3.82 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 36 1.17 Cell cycle control, Cell division, chromosome partitioning
V 71 2.32 Defense mechanisms
T 144 4.7 Signal transduction mechanisms
M 134 4.37 Cell wall/membrane biogenesis
N 47 1.53 Cell motility
U 33 1.08 Intracellular trafficking and secretion
O 118 3.85 Posttranslational modification, protein turnover, chaperones
C 183 5.97 Energy production and conversion
G 172 5.61 Carbohydrate transport and metabolism
E 297 9.69 Amino acid transport and metabolism
F 95 3.1 Nucleotide transport and metabolism
H 161 5.25 Coenzyme transport and metabolism
I 172 5.61 Lipid transport and metabolism
P 187 6.1 Inorganic ion transport and metabolism
Q 95 3.1 Secondary metabolites biosynthesis, transport and catabolism
R 325 10.6 General function prediction only
S 180 5.87 Function unknown
1587 37.05 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the genome