Table 4 Number of genes associated with general COG functional categories
Code | Value | %agea | Description |
|---|---|---|---|
J | 158 | 4.32 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 227 | 6.21 | Transcription |
L | 97 | 2.65 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 34 | 0.93 | Cell cycle control, Cell division, chromosome partitioning |
V | 43 | 1.18 | Defense mechanisms |
T | 105 | 2.87 | Signal transduction mechanisms |
M | 136 | 3.72 | Cell wall/membrane biogenesis |
N | 41 | 1.12 | Cell motility |
U | 40 | 1.09 | Intracellular trafficking and secretion |
O | 78 | 2.13 | Posttranslational modification, protein turnover, chaperones |
C | 156 | 4.27 | Energy production and conversion |
G | 191 | 5.22 | Carbohydrate transport and metabolism |
E | 269 | 7.36 | Amino acid transport and metabolism |
F | 78 | 2.13 | Nucleotide transport and metabolism |
H | 122 | 3.34 | Coenzyme transport and metabolism |
I | 117 | 3.20 | Lipid transport and metabolism |
P | 149 | 4.07 | Inorganic ion transport and metabolism |
Q | 85 | 2.32 | Secondary metabolites biosynthesis, transport and catabolism |
R | 306 | 8.37 | General function prediction only |
S | 264 | 7.22 | Function unknown |
– | 960 | 26.25 | Not in COGs |