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Table 8 Taxonomic composition

From: Functional and taxonomic classification of a greenhouse water drain metagenome

Phylum

Greenhouse MG-RAST

Greenhouse Kraken

Acidobacteria

0.0015405

0.0012883

Actinobacteria

0.0267721

0.0316892

Aquificae

0.0003382

0.0000208

Armatimonadetes

NA

0.0000139

Bacteroidetes

0.0208696

0.0049244

Chlamydiae

0.0002807

0.0000231

Chlorobi

0.0012536

0.0005910

Chloroflexi

0.0030123

0.0010620

Chrysiogenetes

0.0003128

0.0001454

Crenarchaeota

NA

0.0001524

Cyanobacteria

0.0047115

0.0015376

Deferribacteres

0.0002573

0.0000185

Deinococcus-Thermus

0.0024569

0.0021171

Dictyoglomi

0.0000570

NA

Elusimicrobia

0.0000478

NA

Euryarchaeota

NA

0.0005772

Fibrobacteres

0.0000351

0.0000277

Firmicutes

0.0107219

0.0047444

Fusobacteria

0.0002528

0.0000300

Gemmatimonadetes

0.0003763

0.0001316

Ignavibacteriae

NA

0.0000162

Lentisphaerae

0.0001322

NA

Nitrospirae

0.0001816

0.0001247

Planctomycetes

0.0019784

0.0006049

Proteobacteria

0.9125950

0.9467869

Spirochaetes

0.0007344

0.0008519

Synergistetes

0.0005554

0.0000139

Tenericutes

0.0000585

0.0001893

Thermodesulfobacteria

NA

0.0000231

Thermotogae

0.0004699

0.0001732

Verrucomicrobia

0.0099982

0.0021217

  1. Relative abundances at phylum level using MG-RAST and Kraken, Relative abundances were determinate using the  normalized number of reads of each order divided into the total number of reads