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Table 4 Number of genes associated with general COG functional categories

From: First genome sequencing and comparative analyses of Corynebacterium pseudotuberculosis strains from Mexico

Code MEX1 MEX9 MEX25 MEX29 MEX30 MEX31 Description
Value %age Value %age Value %age Value %age Value %age Value %age  
J 182 9.01 182 8.99 181 8.98 186 9.15 183 9.11 189 9.18 Translation, ribosomal structure and biogenesis
A 2 0.10 2 0.10 2 0.10 2 0.10 2 0.10 2 0.10 RNA processing and modification
K 138 6.83 139 6.87 137 6.80 138 6.79 136 6.77 134 6.51 Transcription
L 105 5.20 105 5.19 96 4.76 102 5.02 102 5.08 101 4.91 Replication, recombination and repair
B 0 0 0 0 0 0 0 0 1 0.05 0 0 Chromatin structure and dynamics
D 44 2.18 43 2.12 45 2.23 45 2.22 43 2.14 47 2.28 Cell cycle control, Cell division, chromosome partitioning
V 68 3.37 67 3.31 69 3.42 71 3.49 75 3.74 70 3.40 Defense mechanisms
T 99 4.90 101 4.99 99 4.91 103 5.07 98 4.88 98 4.76 Signal transduction mechanisms
M 124 6.14 122 6.03 119 5.90 120 5.91 119 5.93 117 5.69 Cell wall/membrane biogenesis
N 21 1.04 22 1.09 20 0.99 20 0.98 13 0.65 17 0.83 Cell motility
U 32 1.58 31 1.53 30 1.49 31 1.53 29 1.44 30 1.46 Intracellular trafficking and secretion
O 128 6.33 122 6.03 121 6.00 126 6.20 122 6.08 122 5.93 Posttranslational modification, protein turnover, chaperones
C 125 6.19 124 6.12 116 5.75 124 6.10 123 6.13 121 5.88 Energy production and conversion
G 158 7.82 154 7.61 151 7.49 156 7.68 151 7.52 161 7.82 Carbohydrate transport and metabolism
E 212 10.49 213 10.52 204 10.12 213 10.48 219 10.91 223 10.84 Amino acid transport and metabolism
F 82 4.06 82 4.05 79 3.92 82 4.04 78 3.88 81 3.94 Nucleotide transport and metabolism
H 143 7.08 141 6.96 135 6.70 141 6.94 151 7.52 152 7.39 Coenzyme transport and metabolism
I 92 4.55 91 4.49 90 4.46 93 4.58 86 4.28 87 4.23 Lipid transport and metabolism
P 162 8.02 157 7.75 162 8.04 162 7.97 166 8.27 168 8.16 Inorganic ion transport and metabolism
Q 49 2.43 46 2.27 46 2.28 48 2.36 52 2.59 50 2.43 Secondary metabolites biosynthesis, transport, and catabolism
R 170 8.41 164 8.10 157 7.79 167 8.22 167 8.32 169 8.21 General function prediction only
S 138 6.83 142 7.01 127 6.30 141 6.94 138 6.87 140 6.80 Function unknown
14 0.69 12 0.59 7 0.35 12 0.59 10 0.50 12 0.58 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome