Table 4 Number of genes associated with the general COG functional categories
From: Complete genome sequence of the Robinia pseudoacacia L. symbiont Mesorhizobium amorphae CCNWGS0123
Code | Value | % of total | Description |
|---|---|---|---|
J | 190 | 2.64 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 467 | 6.49 | Transcription |
L | 200 | 2.78 | Replication, recombination and repair |
B | 4 | 0.06 | Chromatin structure and dynamics |
D | 26 | 0.36 | Cell cycle control, mitosis and meiosis |
V | 26 | 0.36 | Defense mechanisms |
T | 19 | 0.26 | Signal transduction mechanisms |
M | 253 | 3.51 | Cell wall/membrane biogenesis |
N | 43 | 0.60 | Cell motility |
U | 101 | 1.40 | Intracellular trafficking and secretion |
O | 181 | 2.51 | Posttranslational modification, protein turnover, chaperones |
C | 328 | 4.56 | Energy production and conversion |
G | 492 | 6.83 | Carbohydrate transport and metabolism |
E | 765 | 10.63 | Amino acid transport and metabolism |
F | 66 | 0.92 | Nucleotide transport and metabolism |
H | 189 | 2.63 | Coenzyme transport and metabolism |
I | 233 | 3.24 | Lipid transport and metabolism |
P | 283 | 3.93 | Inorganic ion transport and metabolism |
Q | 197 | 2.74 | Secondary metabolites biosynthesis, transport and catabolism |
R | 734 | 10.20 | General function prediction only |
S | 485 | 6.74 | Function unknown |
– | 1690 | 23.48 | Not in COGs |