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Table 3 Genome statistics

From: High quality draft genome sequences of Mycoplasma agassizii strains PS6T and 723 isolated from Gopherus tortoises with upper respiratory tract disease

Attribute Strain PS6T Strain 723
Value % of Total Value % of Total
Genome size (bp) 1,274,972 100.00 1,211,209 100.00
DNA coding (bp) 1124,547a 88.20c 1072,218a 88.52c
DNA G + C (bp) 362,520 28.43c 343,241 28.34c
DNA scaffolds 8 100.00 40 100.00
Total genes 1027 100.00 997 100.00
Protein coding genes 979 95.33d 955 95.79d
RNA genes 35 3.41d 35 3.51d
Pseudo genes 13 1.27d 7 0.70d
Genes in internal clusters
Genes with function prediction 467b 47.70e 301b 31.52e
Genes assigned to COGs 581 59.35e 577 60.42e
Genes with Pfam domains 608 62.10e 607 63.56e
Genes with signal peptides 160 16.34e 150 15.71e
Genes with transmembrane helices 294 30.03e 288 30.16e
CRISPR repeats 0 0
  1. aProtein-coding sequences, not including stop codons
  2. bProteins not annotated as “hypothetical protein” by PGAP
  3. cRelative to genome size
  4. dRelative to total number of genes
  5. eRelative to protein-coding genes