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Table 4 Number of genes associated with general COG functional categories

From: Strategies for high-altitude adaptation revealed from high-quality draft genome of non-violacein producing Janthinobacterium lividum ERGS5:01

Code Value %age Description
J 187 6.51% Translation, ribosomal structure and biogenesis
A 1 0.03% RNA processing and modification
K 207 7.21% Transcription
L 91 3.17% Replication, recombination and repair
B 2 0.07% Chromatin structure and dynamics
D 27 0.94% Cell cycle control, Cell division, chromosome partitioning
V 66 2.30% Defense mechanisms
T 240 8.35% Signal transduction mechanisms
M 198 6.89% Cell wall/membrane biogenesis
N 140 4.87% Cell motility
U 76 2.65% Intracellular trafficking and secretion
O 131 4.56% Posttranslational modification, protein turnover, chaperones
C 144 5.01% Energy production and conversion
G 130 4.52% Carbohydrate transport and metabolism
E 221 7.69% Amino acid transport and metabolism
F 71 2.47% Nucleotide transport and metabolism
H 145 5.05% Coenzyme transport and metabolism
I 121 4.21% Lipid transport and metabolism
P 147 5.12% Inorganic ion transport and metabolism
Q 51 1.78% Secondary metabolites biosynthesis, transport and catabolism
R 216 7.52% General function prediction only
S 153 5.33% Function unknown
2134 45.47% Not in COGs
  1. The total is based on the total number of protein coding genes in the genome