Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 187 | 6.51% | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03% | RNA processing and modification |
K | 207 | 7.21% | Transcription |
L | 91 | 3.17% | Replication, recombination and repair |
B | 2 | 0.07% | Chromatin structure and dynamics |
D | 27 | 0.94% | Cell cycle control, Cell division, chromosome partitioning |
V | 66 | 2.30% | Defense mechanisms |
T | 240 | 8.35% | Signal transduction mechanisms |
M | 198 | 6.89% | Cell wall/membrane biogenesis |
N | 140 | 4.87% | Cell motility |
U | 76 | 2.65% | Intracellular trafficking and secretion |
O | 131 | 4.56% | Posttranslational modification, protein turnover, chaperones |
C | 144 | 5.01% | Energy production and conversion |
G | 130 | 4.52% | Carbohydrate transport and metabolism |
E | 221 | 7.69% | Amino acid transport and metabolism |
F | 71 | 2.47% | Nucleotide transport and metabolism |
H | 145 | 5.05% | Coenzyme transport and metabolism |
I | 121 | 4.21% | Lipid transport and metabolism |
P | 147 | 5.12% | Inorganic ion transport and metabolism |
Q | 51 | 1.78% | Secondary metabolites biosynthesis, transport and catabolism |
R | 216 | 7.52% | General function prediction only |
S | 153 | 5.33% | Function unknown |
– | 2134 | 45.47% | Not in COGs |