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Table 3 Genome statistics

From: Strategies for high-altitude adaptation revealed from high-quality draft genome of non-violacein producing Janthinobacterium lividum ERGS5:01

Attribute Value % of Total
Genome size (bp) 5,168,928 100.00%
DNA coding (bp) 4,513,533 87.32%
DNA G + C (bp) 3,126,125 60.48%
DNA scaffolds 16 100.00%
Total genes 4693 100.00%
Protein coding genes 4575 97.49%
RNA genes 118 2.51%
Pseudo genesa 600 12.78%
Genes in internal clusters 805 17.15%
Genes with function prediction 2988 63.67%
Genes assigned to COGs 2559 54.53%
Genes with Pfam domains 3160 67.33%
Genes with signal peptides 435 9.27%
Genes with transmembrane helices 908 19.35%
CRISPR repeats 0 0.00%
  1. aPseudogenes may also be counted as protein coding or RNA genes, so is not additive under total gene count