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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequence of Bosea sp. WAO an arsenite and sulfide oxidizer isolated from a pyrite rock outcrop in New Jersey

Code

Value

%age

Description

J

212

4.44

Translation, ribosomal structure and biogenesis

A

0

0

RNA processing and modification

K

388

8.13

Transcription

L

112

2.35

Replication, recombination and repair

B

3

0.06

Chromatin structure and dynamics

D

29

0.61

Cell cycle control, cell division, chromosome partitioning

V

109

2.28

Defense mechanisms

T

213

4.46

Signal transduction mechanisms

M

239

5.01

Cell wall/membrane biogenesis

N

75

1.57

Cell motility

U

60

1.26

Intracellular trafficking and secretion

O

175

3.66

Posttranslational modification, protein turnover, chaperones

C

333

6.97

Energy production and conversion

G

276

5.78

Carbohydrate transport and metabolism

E

657

13.76

Amino acid transport and metabolism

F

102

2.14

Nucleotide transport and metabolism

H

233

4.88

Coenzyme transport and metabolism

I

249

5.21

Lipid transport and metabolism

P

385

8.06

Inorganic ion transport and metabolism

Q

155

3.25

Secondary metabolites biosynthesis, transport and catabolism

R

470

9.84

General function prediction only

S

268

5.61

Function unknown

1534

26.79

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome