Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 204 | 6.26 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 185 | 5.68 | Transcription |
L | 106 | 3.25 | Replication, recombination and repair |
B | 3 | 0.09 | Chromatin structure and dynamics |
D | 32 | 0.98 | Cell cycle control, Cell division, chromosome partitioning |
V | 54 | 1.66 | Defense mechanisms |
T | 86 | 2.64 | Signal transduction mechanisms |
M | 150 | 4.6 | Cell wall/membrane biogenesis |
N | 17 | 0.52 | Cell motility |
U | 36 | 1.1 | Intracellular trafficking and secretion |
O | 164 | 5.03 | Posttranslational modification, protein turnover, chaperones |
C | 228 | 7 | Energy production and conversion |
G | 235 | 7.21 | Carbohydrate transport and metabolism |
E | 420 | 12.89 | Amino acid transport and metabolism |
F | 91 | 2.79 | Nucleotide transport and metabolism |
H | 181 | 5.55 | Coenzyme transport and metabolism |
I | 203 | 6.23 | Lipid transport and metabolism |
P | 183 | 5.62 | Inorganic ion transport and metabolism |
Q | 150 | 4.6 | Secondary metabolites biosynthesis, transport and catabolism |
R | 320 | 9.82 | General function prediction only |
S | 178 | 5.46 | Function unknown |
– | 1289 | 30.94 | Not in COGs |