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Table 4 Number of genes associated with general COG functional categories

From: Genome sequence of Planktotalea frisia type strain (SH6-1T), a representative of the Roseobacter group isolated from the North Sea during a phytoplankton bloom

Code Value %age Description
J 204 6.26 Translation, ribosomal structure and biogenesis
A 0 0 RNA processing and modification
K 185 5.68 Transcription
L 106 3.25 Replication, recombination and repair
B 3 0.09 Chromatin structure and dynamics
D 32 0.98 Cell cycle control, Cell division, chromosome partitioning
V 54 1.66 Defense mechanisms
T 86 2.64 Signal transduction mechanisms
M 150 4.6 Cell wall/membrane biogenesis
N 17 0.52 Cell motility
U 36 1.1 Intracellular trafficking and secretion
O 164 5.03 Posttranslational modification, protein turnover, chaperones
C 228 7 Energy production and conversion
G 235 7.21 Carbohydrate transport and metabolism
E 420 12.89 Amino acid transport and metabolism
F 91 2.79 Nucleotide transport and metabolism
H 181 5.55 Coenzyme transport and metabolism
I 203 6.23 Lipid transport and metabolism
P 183 5.62 Inorganic ion transport and metabolism
Q 150 4.6 Secondary metabolites biosynthesis, transport and catabolism
R 320 9.82 General function prediction only
S 178 5.46 Function unknown
1289 30.94 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome