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Table 3 Genome statistics

From: High quality draft genome sequence of Mycoplasma testudineum strain BH29T, isolated from the respiratory tract of a desert tortoise

Attribute

Value

% of Total

Genome size (bp)

960,895

100.00

DNA coding (bp)

865,251a

90.05c

DNA G + C (bp)

264,678

27.54c

DNA scaffolds

25

100.00

Total genes

829

100.00

Protein coding genes

788

95.05d

RNA genes

35

4.22d

Pseudo genes

6

0.72d

Genes in internal clusters

Genes with function prediction

370b

46.95e

Genes assigned to COGs

539

68.40e

Genes with Pfam domains

558

70.81e

Genes with signal peptides

78

9.90e

Genes with transmembrane helices

217

27.54e

CRISPR repeats

4

  1. aProtein-coding sequences, not including stop codons
  2. bProteins not annotated as “hypothetical protein” by PGAP
  3. cRelative to genome size
  4. dRelative to total number of genes
  5. eRelative to protein-coding genes