Skip to main content

Advertisement

Table 6 SNPs identified between sample MixIX and Diuraphis noxia biotype SAM

From: Genome of Russian wheat aphid an economically important cereal aphid

SNP effecta Value %age of total Number of genes %age of genes with KOG classification
Synonymous 18,289 19.85 5677 62.37
Substitution 63,035 68.42 9674 83.54
Truncation 6844 7.43 2672 74.93
Frame shift 2375 2.58 1008 45.54
Insertion 579 0.63 163 35.58
Deletion 504 0.55 109 22.02
Extension 499 0.54 300 37.00
  1. aWhere synonymous SNPs cause no amino acid change, substitution SNPs cause a single amino acid substitution, truncation SNPs introduces of a stop codon, frame shit SNPs disrupt the reading frame through deletions and/or insertions of 1 or 2 bases; insertion SNPs introduces an additional codon; deletion SNPs is where a codon is removed and extension SNPs disrupt existing stop codons