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Table 3 Genome statistics

From: Complete genome sequence of Pseudomonas alcaliphila JAB1 (=DSM 26533), a versatile degrader of organic pollutants

Attribute

Value

% of Total

Genome size (bp)

5,340,293

100

DNA coding (bp)

4,749,316

88.93

DNA G + C (bp)

3,339,724

62.54

DNA scaffolds

1

 

Total genes

4908

100

Protein coding genes

4773

97.25

RNA genes

81

1.65

Pseudo genes

54

1.10

Genes in internal clusters

NA

 

Genes with function prediction

3816

77.75

Genes assigned to COGs

3927

80.01

Genes with Pfam domains

4221

86.00

Genes with signal peptides

557

11.35

Genes with transmembrane helices

1139

23.21

CRISPR repeats

3

0.06