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Table 3 Genome statistics

From: Complete genome sequence of Pseudomonas alcaliphila JAB1 (=DSM 26533), a versatile degrader of organic pollutants

Attribute Value % of Total
Genome size (bp) 5,340,293 100
DNA coding (bp) 4,749,316 88.93
DNA G + C (bp) 3,339,724 62.54
DNA scaffolds 1  
Total genes 4908 100
Protein coding genes 4773 97.25
RNA genes 81 1.65
Pseudo genes 54 1.10
Genes in internal clusters NA  
Genes with function prediction 3816 77.75
Genes assigned to COGs 3927 80.01
Genes with Pfam domains 4221 86.00
Genes with signal peptides 557 11.35
Genes with transmembrane helices 1139 23.21
CRISPR repeats 3 0.06