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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile

Code Value %age Description
J 165 4.27 Translation, ribosomal structure and biogenesis
A 1 0.03 RNA processing and modification
K 102 2.64 Transcription
L 121 3.13 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 31 0.80 Cell cycle control, Cell division, chromosome partitioning
V 59 1.53 Defense mechanisms
T 111 2.87 Signal transduction mechanisms
M 138 3.57 Cell wall/membrane biogenesis
N 69 1.78 Cell motility
U 46 1.19 Intracellular trafficking and secretion
O 88 2.28 Posttranslational modification, protein turnover, chaperones
C 124 3.21 Energy production and conversion
G 75 1.94 Carbohydrate transport and metabolism
E 116 3.00 Amino acid transport and metabolism
F 56 1.45 Nucleotide transport and metabolism
H 103 2.66 Coenzyme transport and metabolism
I 53 1.37 Lipid transport and metabolism
P 93 2.41 Inorganic ion transport and metabolism
Q 22 0.57 Secondary metabolites biosynthesis, transport and catabolism
R 99 2.56 General function prediction only
S 131 3.38 Function unknown
2063 53.36 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome