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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring

Code Value % age Description
J 171 8.81 Translation, ribosomal structure and biogenesis
A 0 0 RNA processing and modification
K 104 5.36 Transcription
L 73 3.76 Replication, recombination and repair
B 0 0 Chromatin structure and dynamics
D 27 1.39 Cell cycle control, Cell división, chromosome partitioning
V 46 2.37 Defense mechanisms
T 135 6.95 Signal transduction mechanisms
M 108 5.56 Cell wall/membrane biogenesis
N 86 4.43 Cell motility
U 28 1.44 Intracellular trafficking and secretion
O 71 3.66 Posttranslational modification, protein turnover, chaperones
C 119 6.13 Energy production and conversion
G 106 5.46 Carbohydrate transport and metabolism
E 229 11.79 Amino acid transport and metabolism
F 68 3.50 Nucleotide transport and metabolism
H 103 5.30 Coenzyme transport and metabolism
I 44 2.27 Lipid transport and metabolism
P 129 6.64 Inorganic ion transport and metabolism
Q 18 0.93 Secondary metabolites biosynthesis, transport and catabolism
R 161 8.29 General function prediction only
S 85 4.38 Function unknown
888 33.70 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome; COG was obtained from the JGI IMG pipeline [34]