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Table 5 Number of genes associated with general COG functional categories

From: Genome sequence of the model plant pathogen Pectobacterium carotovorum SCC1

Code Value %age Description
J 183 4.21 Translation, ribosomal structure and biogenesis
A 2 0.05 RNA processing and modification
K 332 7.63 Transcription
L 161 3.70 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 40 0.92 Cell cycle control, Cell division, chromosome partitioning
V 61 1.40 Defense mechanisms
T 242 5.56 Signal transduction mechanisms
M 241 5.54 Cell wall/membrane biogenesis
N 114 2.62 Cell motility
U 122 2.81 Intracellular trafficking and secretion
O 152 3.50 Posttranslational modification, protein turnover, chaperones
C 248 5.70 Energy production and conversion
G 376 8.65 Carbohydrate transport and metabolism
E 435 10.00 Amino acid transport and metabolism
F 94 2.16 Nucleotide transport and metabolism
H 177 4.07 Coenzyme transport and metabolism
I 103 2.37 Lipid transport and metabolism
P 318 7.31 Inorganic ion transport and metabolism
Q 67 1.54 Secondary metabolites biosynthesis, transport and catabolism
R 445 10.23 General function prediction only
S 358 8.23 Function unknown
537 12.35 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome