Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 160 | 5.30 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 193 | 6.39 | Transcription |
L | 117 | 3.87 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 28 | 0.92 | Cell cycle control, Cell division, chromosome partitioning |
V | 50 | 1.65 | Defense mechanisms |
T | 79 | 2.61 | Signal transduction mechanisms |
M | 137 | 4.53 | Cell wall/membrane biogenesis |
N | 30 | 0.99 | Cell motility |
U | 23 | 0.76 | Intracellular trafficking and secretion |
O | 98 | 3.24 | Posttranslational modification, protein turnover, chaperones |
C | 169 | 5.59 | Energy production and conversion |
G | 177 | 5.86 | Carbohydrate transport and metabolism |
E | 307 | 10.17 | Amino acid transport and metabolism |
F | 73 | 2.41 | Nucleotide transport and metabolism |
H | 107 | 3.54 | Coenzyme transport and metabolism |
I | 93 | 3.08 | Lipid transport and metabolism |
P | 200 | 6.62 | Inorganic ion transport and metabolism |
Q | 36 | 1.19 | Secondary metabolites biosynthesis, transport and catabolism |
R | 0 | 0 | General function prediction only |
S | 481 | 15.93 | Function unknown |
– | 497 | 16.46 | Not in COGs |