Table 4 Number of genes associated with general COG functional categories
From: Genome sequence of Acuticoccus yangtzensis JL1095T (DSM 28604T) isolated from the Yangtze Estuary
Code | Value | %age | Description |
|---|---|---|---|
J | 162 | 3.78 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 139 | 3.24 | Transcription |
L | 111 | 2.59 | Replication, recombination and repair |
B | 3 | 0.07 | Chromatin structure and dynamics |
D | 19 | 0.44 | Cell cycle control, Cell division, chromosome partitioning |
V | 20 | 0.47 | Defense mechanisms |
T | 93 | 2.17 | Signal transduction mechanisms |
M | 126 | 2.94 | Cell wall/membrane biogenesis |
N | 30 | 0.70 | Cell motility |
U | 43 | 1.00 | Intracellular trafficking and secretion |
O | 111 | 2.59 | Posttranslational modification, protein turnover, chaperones |
C | 223 | 5.20 | Energy production and conversion |
G | 198 | 4.62 | Carbohydrate transport and metabolism |
E | 388 | 9.05 | Amino acid transport and metabolism |
F | 63 | 1.47 | Nucleotide transport and metabolism |
H | 122 | 2.85 | Coenzyme transport and metabolism |
I | 138 | 3.22 | Lipid transport and metabolism |
P | 187 | 4.36 | Inorganic ion transport and metabolism |
Q | 109 | 2.54 | Secondary metabolites biosynthesis, transport and catabolism |
R | 378 | 8.82 | General function prediction only |
S | 232 | 5.41 | Function unknown |
– | 1764 | 41.16 | Not in COGs |