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Table 3 Genome statistics

From: Genome sequence of Acuticoccus yangtzensis JL1095T (DSM 28604T) isolated from the Yangtze Estuary

Attribute

Value

% of Total

Genome size (bp)

5,043,263

100.00

DNA coding (bp)

4,388,143

87.01

DNA G + C (bp)

3,461,191

68.63

DNA scaffolds

28

100.00

Total genes

4425

100.00

Protein coding genes

4286

96.86

RNA genes

56

1.27

Pseudo genes

83

1.88

Genes in internal clusters

NA

NA

Genes with function prediction

3781

85.45

Genes assigned to COGs

2522

56.99

Genes with Pfam domains

3139

70.94

Genes with signal peptides

348

7.86

Genes with transmembrane helices

1043

23.57

CRISPR repeats

3

0.07

  1. NA, no analysis