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Table 3 Genome statistics

From: Genome sequence of Acuticoccus yangtzensis JL1095T (DSM 28604T) isolated from the Yangtze Estuary

Attribute Value % of Total
Genome size (bp) 5,043,263 100.00
DNA coding (bp) 4,388,143 87.01
DNA G + C (bp) 3,461,191 68.63
DNA scaffolds 28 100.00
Total genes 4425 100.00
Protein coding genes 4286 96.86
RNA genes 56 1.27
Pseudo genes 83 1.88
Genes in internal clusters NA NA
Genes with function prediction 3781 85.45
Genes assigned to COGs 2522 56.99
Genes with Pfam domains 3139 70.94
Genes with signal peptides 348 7.86
Genes with transmembrane helices 1043 23.57
CRISPR repeats 3 0.07
  1. NA, no analysis