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Table 4 Number of genes associated with general COG functional categories

From: Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium

Code

Value

%age

Description

J

226

4.25

Translation ribosomal structure and biogenesis

A

1

0.02

RNA processing and modification

K

492

9.25

Transcription

L

124

2.33

Replication recombination and repair

B

1

0.02

Chromatin structure and dynamics

D

34

0.64

Cell cycle control Cell division chromosome partitioning

V

98

1.84

Defense mechanisms

T

274

5.15

Signal transduction mechanisms

M

361

6.79

Cell wall/membrane biogenesis

N

132

2.48

Cell motility

U

116

2.18

Intracellular trafficking and secretion

O

180

3.39

Posttranslational modification protein turnover chaperones

C

376

7.07

Energy production and conversion

G

367

6.9

Carbohydrate transport and metabolism

E

520

9.78

Amino acid transport and metabolism

F

102

1.92

Nucleotide transport and metabolism

H

285

5.36

Coenzyme transport and metabolism

I

300

5.64

Lipid transport and metabolism

P

338

6.36

Inorganic ion transport and metabolism

Q

190

3.57

Secondary metabolites biosynthesis transport and catabolism

R

514

9.67

General function prediction only

S

213

4.01

Function unknown

 

1705

26.9

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome