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Table 5 Genome statistics

From: Draft genome sequences of three fungal-interactive Paraburkholderia terrae strains, BS007, BS110 and BS437

Attribute

Strain BS110

Strain BS007

Strain BS437

Value

% of totala

Value

% of totala

Value

% of totala

Genome size (bp)

11,178,081

100

11,025,273

100

11,303,071

100

Coding DNA (bp)

9,596,382

85.85

9,573,245

86.83

9,724,031

86.03

DNA G + C content

6,912,525

61.84

6,823,541

61.89

6,983,037

61.78

DNA Scaffolds

658

788

843

Total genes

11,984

100

11,991

100

12,333

100

Protein encoding genes

10,288

85.85

10,411

86.83

10,610

86.03

RNA genes

54

 

48

 

53

 

Pseudogenes

N/D

N/D

N/D

Genes in internal clusters

N/D

N/D

N/D

Genes with function prediction

4458

37.2

4461

37.2

4743

38.46

Genes assigned to COGs

8327

69.49

8273

69

8465

68.64

Genes assigned Pfam domains

4015

33,50

3857

32.17

4106

33.29

Genes with signal peptides

976

8.14

1001

8.35

1053

8.53

Genes with transmembrane helices

1592

13,28

1555

12.97

1632

13.23

CRISPR spacers

22

 

21

 

15

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein encoding genes in the annotated genome; N/D not determined