Skip to main content

Table 3 Genome statistics

From: Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes

Attribute

Value

% of Totala

Genome size (bp)

6,143,638

100

DNA coding (bp)

5,503,417

89.6

DNA G + C (bp)

3,739,670

60.9

DNA scaffolds

69

100

Total genes

5665

100

Protein coding genes

5544

97.86

RNA genes

121

2.14

Pseudo genes

60

1.06

Genes in internal clusters

1731

30.56

Genes with function prediction

4524

79.86

Genes assigned to COGs

4091

72.22

Genes with Pfam domains

7255

84.70

Genes with signal peptides

608

10.73

Genes with transmembrane helices

1291

22.79

CRISPR repeats

0

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome