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Table 6 Number of genes associated with general COG functional categories

From: Genomic insights into Mycobacterium simiae human colonization

Code Value %agea Description
J 161 2.53 Translation, ribosomal structure and biogenesis
A 21 0.33 RNA processing and modification
K 448 7.05 Transcription
L 192 3.02 Replication, recombination and repair
B 1 0.01 Chromatin structure and dynamics
D 55 0.86 Cell cycle control, Cell division, chromosome partitioning
V 47 0.73 Defense mechanisms
T 218 3.43 Signal transduction mechanisms
M 159 2.50 Cell wall/membrane biogenesis
N 57 0.89 Cell motility
U 36 0.56 Intracellular trafficking and secretion
O 153 2.41 Posttranslational modification, protein turnover, chaperones
C 447 7.03 Energy production and conversion
G 243 3.82 Carbohydrate transport and metabolism
E 298 4.69 Amino acid transport and metabolism
F 82 1.29 Nucleotide transport and metabolism
H 210 3.30 Coenzyme transport and metabolism
I 558 8.78 Lipid transport and metabolism
P 239 3.76 Inorganic ion transport and metabolism
Q 494 7.77 Secondary metabolites biosynthesis, transport and catabolism
R 795 12.51 General function prediction only
S 358 5.63 Function unknown
1082 17.03 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the genome