Table 6 Number of genes associated with general COG functional categories
From: Genomic insights into Mycobacterium simiae human colonization
Code | Value | %agea | Description |
|---|---|---|---|
J | 161 | 2.53 | Translation, ribosomal structure and biogenesis |
A | 21 | 0.33 | RNA processing and modification |
K | 448 | 7.05 | Transcription |
L | 192 | 3.02 | Replication, recombination and repair |
B | 1 | 0.01 | Chromatin structure and dynamics |
D | 55 | 0.86 | Cell cycle control, Cell division, chromosome partitioning |
V | 47 | 0.73 | Defense mechanisms |
T | 218 | 3.43 | Signal transduction mechanisms |
M | 159 | 2.50 | Cell wall/membrane biogenesis |
N | 57 | 0.89 | Cell motility |
U | 36 | 0.56 | Intracellular trafficking and secretion |
O | 153 | 2.41 | Posttranslational modification, protein turnover, chaperones |
C | 447 | 7.03 | Energy production and conversion |
G | 243 | 3.82 | Carbohydrate transport and metabolism |
E | 298 | 4.69 | Amino acid transport and metabolism |
F | 82 | 1.29 | Nucleotide transport and metabolism |
H | 210 | 3.30 | Coenzyme transport and metabolism |
I | 558 | 8.78 | Lipid transport and metabolism |
P | 239 | 3.76 | Inorganic ion transport and metabolism |
Q | 494 | 7.77 | Secondary metabolites biosynthesis, transport and catabolism |
R | 795 | 12.51 | General function prediction only |
S | 358 | 5.63 | Function unknown |
– | 1082 | 17.03 | Not in COGs |