Table 5 Genome statistics
From: Genomic insights into Mycobacterium simiae human colonization
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,684,413 | 100 |
DNA coding (bp) | 5,978,008 | 89.43 |
DNA G + C (bp) | 4,416,391 | 66.07 |
DNA scaffolds | 15 | 100 |
Total genes | 6369 | 100 |
Protein coding genes | 6299 | 99.90 |
RNA genes | 70 | 1.10 |
Pseudo genes | 160 | 2.51 |
Genes in internal clusters | 579 | 9.09 |
Genes with function prediction | 4713 | 74.00 |
Genes assigned to COGs | 5272 | 82.29 |
Genes with Pfams domains | 5009 | 78.19 |
Genes with signal peptides | 260 | 4.08 |
Genes with transmembrane helices | 1292 | 20.29 |
CRISPR repeats | 15 |