Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 221 | 5.60 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 247 | 6.25 | Transcription |
L | 112 | 2.84 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 63 | 1.60 | Cell cycle control, Cell division, chromosome partitioning |
V | 78 | 1.98 | Defense mechanisms |
T | 149 | 3.77 | Signal transduction mechanisms |
M | 210 | 5.32 | Cell wall/membrane biogenesis |
N | 61 | 1.54 | Cell motility |
U | 28 | 0.71 | Intracellular trafficking and secretion |
O | 112 | 2.84 | Posttranslational modification, protein turnover, chaperones |
Z | 3 | 0.07 | Cytoskeleton |
C | 167 | 4.23 | Energy production and conversion |
G | 250 | 6.33 | Carbohydrate transport and metabolism |
E | 279 | 7.07 | Amino acid transport and metabolism |
F | 96 | 2.43 | Nucleotide transport and metabolism |
H | 169 | 4.28 | Coenzyme transport and metabolism |
I | 125 | 3.17 | Lipid transport and metabolism |
P | 145 | 3.67 | Inorganic ion transport and metabolism |
Q | 99 | 2.50 | Secondary metabolites biosynthesis, transport and catabolism |
X | 82 | 2.07 | Mobilome: prophages, transposons |
R | 173 | 4.38 | General function prediction only |
S | 215 | 5.44 | Function unknown |
– | 865 | 21.90 | Not in COGs |