Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 234 | 2.09 | Translation, ribosomal structure and biogenesis |
A | 42 | 0.37 | RNA processing and modification |
K | 163 | 1.46 | Transcription |
L | 126 | 1.12 | Replication, recombination and repair |
B | 19 | 0.17 | Chromatin structure and dynamics |
D | 32 | 0.29 | Cell cycle control, Cell division, chromosome partitioning |
V | 32 | 0.29 | Defense mechanisms |
T | 153 | 1.37 | Signal transduction mechanisms |
M | 126 | 0.44 | Cell wall/membrane biogenesis |
N | 2 | 0.02 | Cell motility |
U | 241 | 2.15 | Intracellular trafficking and secretion |
O | 294 | 2.63 | Posttranslational modification, protein turnover, chaperones |
C | 216 | 1.93 | Energy production and conversion |
G | 399 | 3.56 | Carbohydrate transport and metabolism |
E | 257 | 2.30 | Amino acid transport and metabolism |
F | 65 | 0.58 | Nucleotide transport and metabolism |
H | 63 | 0.56 | Coenzyme transport and metabolism |
I | 140 | 1.25 | Lipid transport and metabolism |
P | 131 | 1.17 | Inorganic ion transport and metabolism |
Q | 186 | 1.66 | Secondary metabolites biosynthesis, transport and catabolism |
R | 0 | 0 | General function prediction only |
S | 1918 | 17.14 | Function unknown |
– | 6402 | 57.2 | Not in KOGs |