Table 3 Genomic statistics
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 44,188,879 | 100 |
DNA coding (bp) | 18,219,288 | 41.2 |
DNA G + C (bp) | 22,057,939 | 49.91 |
DNA scaffolds | 178 | 100 |
Total genes | 11,278 | 100 |
Protein coding genes | 11,184 | 99.16 |
RNA genes | 92 | 0.81 |
Pseudo genes | 2 | 0,1 × 10−1 |
Genes in internal clusters | ND | ND |
Genes with function prediction | 8575 | 76.0 |
Genes assigned to COGs | 4789 | 42.4 |
Genes with Pfam domains | 7978 | 70.8 |
Genes with signal peptides | 1333 | 11.8 |
Genes with transmembrane helices | 2293 | 20.3 |