Table 6 Number of genes associated with the general COG functional categories
From: The complete genome sequence of the rumen bacterium Butyrivibrio hungatei MB2003
Code | Value | % of totala | Description |
|---|---|---|---|
J | 194 | 9.52 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 149 | 7.31 | Transcription |
L | 88 | 4.32 | Replication, recombination and repair |
B | 0 | 0 | Chromatin structure and dynamics |
D | 32 | 1.57 | Cell cycle control, Cell division, chromosome partitioning |
V | 65 | 3.19 | Defense mechanisms |
T | 139 | 6.82 | Signal transduction mechanisms |
M | 155 | 7.61 | Cell wall/membrane biogenesis |
N | 61 | 2.99 | Cell motility |
U | 22 | 1.08 | Intracellular trafficking and secretion |
O | 78 | 3.83 | Posttranslational modification, protein turnover, chaperones |
C | 69 | 3.39 | Energy production and conversion |
G | 243 | 11.93 | Carbohydrate transport and metabolism |
E | 177 | 8.69 | Amino acid transport and metabolism |
F | 80 | 3.93 | Nucleotide transport and metabolism |
H | 79 | 3.88 | Coenzyme transport and metabolism |
I | 72 | 3.53 | Lipid transport and metabolism |
P | 79 | 3.88 | Inorganic ion transport and metabolism |
Q | 16 | 0.79 | Secondary metabolites biosynthesis, transport and catabolism |
R | 158 | 7.76 | General function prediction only |
S | 73 | 3.58 | Function unknown |
– | 1245 | 40.33 | Not in COGs |