Table 4 Number of genes associated with general COG functional categories
Code | ERR11T | CCBAU 10071T | Description | ||
|---|---|---|---|---|---|
Value | %age | Value | %age | ||
J | 225 | 3.65% | 231 | 4.08% | Translation, ribosomal structure and biogenesis |
A | 0 | 00% | 0 | 00% | RNA processing and modification |
K | 458 | 7.44% | 392 | 6.93% | Transcription |
L | 135 | 2.19% | 143 | 2.53% | Replication, recombination and repair |
B | 2 | 0.03% | 2 | 0.04% | Chromatin structure and dynamics |
D | 36 | 0.58% | 39 | 0.69% | Cell cycle control, Cell division, chromosome partitioning |
V | 162 | 2.63% | 134 | 2.37% | Defense mechanisms |
T | 288 | 4.68% | 263 | 4.47% | Signal transduction mechanisms |
M | 316 | 5.13% | 300 | 5.3% | Cell wall/membrane biogenesis |
N | 106 | 1.72% | 109 | 1.93% | Cell motility |
U | 85 | 1.38% | 113 | 2% | Intracellular trafficking and secretion |
O | 245 | 3.98% | 221 | 3.9% | Posttranslational modification, protein turnover, chaperones |
C | 440 | 7.15% | 378 | 6.68% | Energy production and conversion |
G | 438 | 7.11% | 339 | 5.97% | Carbohydrate transport and metabolism |
E | 665 | 10.8% | 623 | 11.01% | Amino acid transport and metabolism |
F | 98 | 1.59% | 94 | 1.66% | Nucleotide transport and metabolism |
H | 309 | 5.02% | 271 | 4.79% | Coenzyme transport and metabolism |
I | 413 | 6.71% | 398 | 7.03% | Lipid transport and metabolism |
P | 358 | 5.81% | 311 | 5.49% | Inorganic ion transport and metabolism |
Q | 266 | 4.32% | 278 | 4.91% | Secondary metabolites biosynthesis, transport and catabolism |
R | 684 | 11.11% | 626 | 11.06% | General function prediction only |
S | 353 | 5.73% | 333 | 5.83% | Function unknown |
– | 3288 | 38.08% | 2948 | 37.5% | Not in COGs |