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Table 3 Nucleotide and gene count levels of the genome

From: Draft genome sequence of Venturia carpophila, the causal agent of peach scab

Attribute

Value

% of Total a

Genome size (bp)

36,917,822

 

DNA coding (bp)

10,768,752

29.17

DNA G + C (bp)

17,485,709

47.36

DNA scaffolds

657

 

Total genes

8352

 

Protein coding genes

8220

98.42

RNA genes

132

1.58

Pseudo genes

Not reported

 

Genes in internal clusters

Not reported

 

Genes with function prediction

4632

56.35

Genes assigned to COGs

1136

13.82

Genes with Pfam domains

2694

32.77

Genes with signal peptides

390

4.74

Genes with transmembrane helices

2622

31.90

CRISPR repeats

4

 
  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome