Table 6 Annotation parameters
Label | CD2A | CD6A | MD2A | MD6A |
|---|---|---|---|---|
Annotation system | IMG/M | IMG/M | IMG/M | IMG/M |
Gene calling program | FragGeneScan version 1.16, prokaryotic GeneMark.hmm version 2.8, Metagene Annotator version 1.0, Prodigal V2.50: November, 2010 | FragGeneScan version 1.16, prokaryotic GeneMark.hmm version 2.8, Metagene Annotator version 1.0, Prodigal V2.50: November, 2010 | FragGeneScan version 1.16, prokaryotic GeneMark.hmm version 2.8, Metagene Annotator version 1.0, Prodigal V2.50: November, 2010 | FragGeneScan version 1.16, prokaryotic GeneMark.hmm version 2.8, Metagene Annotator version 1.0, Prodigal V2.50: November, 2010 |
Annotation algorithm | Â | Â | Â | Â |
Database(s) used | IMG, COG, Pfam, KEGG | IMG, COG, Pfam, KEGG | IMG, COG, Pfam, KEGG | IMG, COG, Pfam, KEGG |