|
Libraries used
|
IUTO
|
IUTP
|
HCZO
|
IUTS
|
|
Assembly tool(s) used
|
SOAPdenovo v1.05 (default)
|
SOAPdenovo v1.05 (default)
|
SOAPdenovo v1.05 (default)
|
SOAPdenovo v1.05 (default)
|
|
Number of contigs after assembly
|
247,547
|
141,229
|
292,231
|
257,101
|
|
Number of singletons after assembly
|
1,568,087
|
83,272
|
1,166,131
|
1,565,449
|
|
minimal contig length
|
200
|
200
|
200
|
200
|
|
Total bases assembled
|
152,203,650
|
90,602,774
|
173,570,670
|
178,522,206
|
|
Contig n50
|
749
|
906
|
695
|
1.1 kb
|
|
% of Sequences assembled
|
38%
|
29%
|
38%
|
38%
|
|
Measure for % assembled
|
reads mapped to contigs using BWA
|
reads mapped to contigs using BWA
|
reads mapped to contigs using BWA
|
reads mapped to contigs using BWA
|
