Skip to main content
Fig. 2 | Standards in Genomic Sciences

Fig. 2

From: Complete genome sequence of Pseudomonas corrugata strain RM1-1-4, a stress protecting agent from the rhizosphere of an oilseed rape bait plant

Fig. 2

Phylogenetic tree showing the position of P. corrugata RM1-1-14 in relationships among other strains of Pseudomonas spp. including P. aeruginosa PAO1 as outgroup. a The tree is based on 16S rRNA gene alignments and was conducted in MEGA6 [3]. Initial tree for the heuristic search were obtained automatically by applying Neighbor-Join and BioNJ algorithms to a matrix of pairwise distances estimated using the Maximum Composite Likelihood approach, and then selecting the topology with superior log likelihood value. b The dendrogram based on protein sequences for representative strains belonging to the existing five subgroups (I-V) of the P. fluorescens complex including P. aeruginosa PAO1 as outgroup (O) and was created by using Composition Vector Approach [5]

Back to article page

Environmental Microbiome

ISSN: 2524-6372