Skip to main content

Table 3 Number of genes associated with the 22 general COG functional categories

From: Complete genome sequence of Paenibacillus yonginensis DCY84T, a novel plant Symbiont that promotes growth via induced systemic resistance

Code Value %agea Description
J 170 4.02 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 360 8.50 Transcription
L 233 5.50 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 30 0.71 Cell cycle control, cell division, chromosome partitioning
V 73 1.72 Defense mechanisms
T 217 5.13 Signal transduction mechanisms
M 190 4.49 Cell wall/membrane/envelope biogenesis
N 61 1.44 Cell motility
U 21 0.50 Intracellular trafficking, secretion, and vesicular transport
O 109 2.58 Posttranslational modification, protein turnover, chaperones
C 121 2.86 Energy production and conversion
G 431 10.18 Carbohydrate transport and metabolism
E 260 6.14 Amino acid transport and metabolism
F 93 2.20 Nucleotide transport and metabolism
H 99 2.34 Coenzyme transport and metabolism
I 104 2.46 Lipid transport and metabolism
P 163 3.85 Inorganic ion transport and metabolism
Q 31 0.73 Secondary metabolites biosynthesis, transport and catabolism
R 334 7.89 General function prediction only
S 278 6.57 Function unknown
1372 32.41 Not in COGs
bTotal 4750 112.21  
  1. aThe percentage is based on the total number of protein coding genes in the annotated genome
  2. bThe total does not correspond to 4498 CDS because some genes are associated with more than one COG functional categories